CoMPLEX Research

2007

• Cinquin,O. (2007). Repressor dimerization in the zebrafish somitogenesis clock. PLoS Computational Biology 3(2), 0293-0303. ISSN: 1553-734X [Detail] [Eprint] [DOI link]
• Cinquin,O., Page,K.M. (2007). Generalized, switch-like competitive heterodimerization networks. Bulletin of Mathematical Biology 69(2), 483-494. ISSN: 0092-8240 [Detail] [Eprint] [DOI link]
• Mallet,J. (2007). Hybrid speciation. Nature 446, 279-283. ISSN: 0028-0836 [Detail]
• Mallet,J., Beltrán,M., Neukirchen,W., Linares,M. (2007). Natural hybridization in heliconiine butterflies: the species boundary as a continuum. BMC Evolutionary Biology 7(28), . ISSN: [Detail]
• Schinaia,S.A., Momiji,H., Bishop,S.R., Simons,R.R., Freeman,S. (2007). Towards a cellular automata model to predict the impacts of aggregate extraction on biological recoverability. 30th International Conference on Coastal Engineering, [Detail]
• Steptoe,A., Shamaei-Tousi,A., Gylfe,Å., Bailey,L., Bergström,S., Coates,A.R., Henderson,B. (2007). Presence of human heat shock protein (Hsp) 60 is associated with decreased seropositivity to pathogens. Is circulating Hsp60 protective against infection? Clin Vaccine Immunol 14(2), 204-207 [Detail]

2006

• Akman,O.E., Broomhead,D.S., Clement,R.A., Abadi,R.V. (2006). Nonlinear time series analysis of jerk nystagmus. [Detail]
• Alarcon,T. and Page,K.M. (2006). Stochastic models of receptor oligomerization by bivalent ligand. J. R. Soc. Interface 3, 545-559 [Detail]
• Alarcon,T., Marches,R. and Page,K.M. (2006). Mathematical models of the fate of lymphoma B cells after antigen receptor ligation with specific antibodies. Journal of Theoretical Biology 240, 54-71. ISSN: 0022-5193 [Detail]
• Arnold,D.H., Amano,K. Takeda,T., Johnston,A. (2006). Neural oscillations and illusory jitter. Perception 35, . ISSN: 0031-5117 [Detail]
• Banaji,M., Baigent,S. (2006). A flexible iterative approach to physiological modelling. in Multidisciplinary approaches to theory in medicine. Studies in multidisciplinarity series. Series edited by Paton,R., McNamara,L.A.. Elsevier [Detail]
• Barenco,M., Tomescu,D., Brewer,D., Callard,R., Stark,J., Hubank,M. (2006). Ranked prediction of p53 targets using hidden variable dynamic modeling. Genome Biol 7(3), R25 [Detail] [Online]
• Brower,A.V.Z., Freitas,A.V.L., Lee,M.-M., Silva-Brandão,K.L., Whinnett,A., Willmott,K.R. (2006). Phylogenetic relationships among the Ithomiini (Lepidoptera: Nymphalidae) inferred from one mitochondrial and two nuclear gene regions. Systematic Entomology 31, 288-301 [Detail]
• Bruno,A., Johnston,A. (2006). Grating adaptation influences the perceived length of an object [Abstract]. Journal of Vision 6(6), 901a. ISSN: 1534-7362 [Detail] [Online]
• Bull,V., Beltrán,M., Jiggins,C.D., McMillan,W.O., Bermingham,E., Mallet,J. (2006). Polyphyly and gene flow between non-sibling Heliconius species. BMC Biology 4(11), [Detail]
• Chandler,R.E., Isham,V.S., Bellone,E., Yang,C., Northrop,P.J. (2006). Space-time modelling of rainfall for continuous simulation. Chapter 5 in Finkenstadt,B., Held,L., Isham,V.S. (ed.) Statistical methos for spatial-temporal systems. Boca Raton: CRC Press [Detail]
• Chau Siu,S., Boushaba,R., Topoyassakul,V., Graham,A., Choudhury,S., Moss,G., Titchener-Hooker,N. (2006). Visualising fouling of a chromatographic matrix using confocal scanning laser microscopy. [Detail]
• Cinquin,O. (2006). Fast-tracking morphogen diffusion. Journal of Theoretical Biology 238(3), 532-540. ISSN: 0022-5193 [Detail] [Eprint] [DOI link]
• Cotton,S., Rogers,D.W., Small,J., Pomiankowski,A., Fowler,K. (2006). Variation in the strength of preference for a male ornament is positively associated with female eyespan in the stalk-eyed fly Diasemopsis meigenii. Proceedings Royal Society London Series B 273, 1287-1292 [Detail]
• DARTNELL,L.R., Desorgher,L., Ward,J.M., COATES,A.J. (2006). Modelling the surface and subsurface Martian radiation environment: implications for astrobiology. Geophysical Research Letters [Detail]
• Dasmahapatra,K.K., Mallet,J. (2006). DNA barcodes: recent successes and future prospects. Heredity. Heredity 97, 254-255. ISSN: 0018-067X [Detail]
• Dawid,A.P. (2006), Lucky Numbers (Teachers' TV) [Detail] [Online]
• Dawid,A.P., Mortera,J., Vicard,P. (2006). Representing and solving complex DNA identification cases using Bayesian networks. 21st International Congress of the International Society for Forensic Genetics, Amorim,A., Corte-Real,F., Morling,N. (ed.) International Congress Series series. Amsterdam:Elsevier, 1288, 484-491 [Detail]
• Dawid,P., Lauritzen,S.L. (2006). The Geometry of Decision Theory. Second International Symposium on Information Geometry and its Applications. Tokyo, 22-28 [Detail]
• Devader,C., Webb,R.J., Thomas,G.M.H., Dale,L. (2006). Xenopus apyrase (xapy), a secreted nucleotidase that is expressed during early development. Gene 367, 135-141. ISSN: 0378-1119 [Detail] [Online]
• Durant,S., Donoso-Barrera,A. Tan,S., Johnston,A. (2006). Moving from spatially segregated to transparent motion: a modelling approach. Biology Letters 2, 101-105 [Detail]
• Engelstädter,J., Charlat,S., Pomiankowski,A., Hurst,G.D.D. (2006). The evolution of cytoplasmic incompatibility types: integrating segregation, inbreeding and outbreeding. Genetics 172, 2601-2611. ISSN: 0016-6731 [Detail]
• Evans,P.M., Woodbine,L., Riballo,E., Gennery,A.R., Hubank,M. and Jeggo,P.A. (2006). Radiation induced delayed cell death in a hypomorphic Artemis cell line. Human Molecular Genetics 15(8), 1303-1311. ISSN: 0964-6906 [Detail]
• Fujisaki,W., Koene,A., Arnold,D., Johnston,A., Nishida,S. (2006). Visual search for a target changing in synchrony with an auditory signal. Proc. Roy. Soc. Lond.,B 273, 865-874 [Detail]
• Hetherington,J.P.J., Warner,A., Seymour,R.M. (2006). Simplification and its consequences in biological modelling: Conclusions from a study of calcium oscillations in hepatocytes. Journal of the Royal Society: Interface 3, 319-331. ISSN: 1742-5689 [Detail]
• Hornett,E.A., Charlat,S., Duplouy,A.M.R., Davies,N., Roderick,G.K., Wedell,N., Hurst,G.D.D. (2006). Evolution of Male Killer Suppression in a Natural Population. Public Library of Science Biology 4(9), 1643-1648 [Detail] [Online]
• Ioannides,A., Johnston,A. J., Griffin,L. (2006). Simultaneous contrast and white's effect as a consequence of a biologically plausible model of brightness filling-in [Abstract]. Journal of Vision 6(6), 707a. ISSN: 1534-7362 [Detail] [Online]
• Johnston,A. (2006). Distorting the apparent duration of visual events. Perception,Supplement 1 35, [Detail]
• Johnston,A., Arnold,D.H., Nishida,S. (2006). Spatially localised distortions of perceived duration. Current Biology 16, 472-477. ISSN: 0960-9822 [Detail]
• Joron,M., Papa,R., Beltrán,M., Chamberlain,N., Mavárez,J., Baxter,S., Abanto,M., Bermingham,E., Humphray,S.J., Rogers,J., Beasley,H., Barlow,K., ffrench-Constant,R.H., Mallet,J., McMillan,W.O., Jiggins,C.D. (2006). A conserved supergene locus controls colour pattern diversity in Heliconius butterflies. PLoS Biology 4(10), e303. ISSN: 1544-9173 [Detail]
• Judah,J.D., Thomas,G.M.H. (2006). Two distinct chloride ion requirements in the constitutive protein secretory pathway. European Journal of Cell Biology 85, 825-836. ISSN: 0171-9335 [Detail] [Online]
• Kanoria,S., Jalan,R., Davies,N.A., Seifalian,A.M., Williams,R., Davidson,B.R. (2006). Remote ischemic preconditioning of the hind limb reduces experimental liver warm ischaemia - reperfusion injury. British Journal of Surgery 93(6), 762-768. ISSN: 0007-1323 [Detail] [Online]
• Koene,A., Arnold,D., Johnston,A. (2006). Multi-sensory comparison improves signal discrimination [Abstract]. Journal of Vision (6), 6-384a. ISSN: 1534-7362 [Detail] [Online]
• Laptev,D., Akman,O.E., Clement,R.A. (2006). Stability of the saccadic system. Biological Cybernetics . ISSN: 0340-1200 [Detail]
• Littlewood,R. (2006). Mental health and intellectual disability: culture abd diversity. Journal of Intellectual Disability Research 50(8), 555-561. ISSN: 0964-2633 [Detail]
• Mallet,J. (2006). What has Drosophila genetics revealed about speciation? Trends in Ecology and Evolution 21(7), 186-193. ISSN: 0169-5347 [Detail]
• Mallet,J. (2006). Species Concepts. in Fox,C.W., Wolf,J.B. (ed.) . Oxford: Oxford University Press, 367-373 [Detail]
• Marsden,R, Lee,D, Maibaum,M, Yeats,C, Orengo,C. (2006). Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space. Nucleic Acids Research 34, 1066-1080. ISSN: 0305-1048 [Detail] [Online]
• Muallem,D.R., Ashmore,J.F. (2006). An anion antiporter model of prestin, the outer hair cell motor protein. Biophysical Journal 90(11), 4035-4045. ISSN: 0006-3495 [Detail]
• Mullen,L.M., Nair,S.P., Ward,J.M., Rycroft,A.N., Henderson,B. (2006). Phage Display in the Study of Infectious Diseases. Trends Microbiol 14, 141-147 [Detail]
• Newton,P.J., Weller,I.V., Williams,I.G., Miller,R.F., Copas,A., Tedder,R.S., Katz,D.R., Chain,B.M. (2006). Monocyte derived dendritic cells from HIV-1 infected individuals partially reconstitute CD4 T-cell responses. AIDS 20(2), 171-180. ISSN: 0269-9370 [Detail]
• Orrell,R. (2006). [Detail]
• Perez-Mansilla,B., Ha,V.L., Justin,N., Wilkins,A.J., Carpenter,C.L., Thomas,G.M. (2006). The differential regulation of phosphatidylinositol 4-phosphate 5-kinases and phospholipase D1 by ADP-ribosylation factors 1 and 6. Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1761(12), 1429-1442. ISSN: 1388-1981 [Detail] [DOI link]
• Reeves,G, Dallman,T, Redfern,O, Akpor,A. Orengo,C. (2006). Structural diversity of domain superfamilies in the CATH database. J Mol Biol 360, 725-741. ISSN: 0022-2836 [Detail] [Online]
• Ruparelia,K.O.,O’Brien,J.M.D., Spencer,J.V., Hill,H.C.H., Johnston,A . (2006). Biological motion and face perception in autistic spectrum disorder. Perception 35, . ISSN: 0031-5117 [Detail]
• Seymour,R.M, Pomiankowski,A. (2006). ESS gene expression of X-linked imprinted genes subject to sexual selection. Journal of Theoretical Biology 241, 81-93. ISSN: 0022-5193 [Detail]
• Spencer,J.V.,O'Brien,J.M.D., Johnston,A., Hill,H. (2006). Infants' discrimination of identity using biological motion cues. Perception 35, 79-89. ISSN: 0031-5117 [Detail]
• Tan,S., Dale,J., Anderson,A., Johnston,A. (2006). Inverse perspective mapping and optic flow: a calibration method and a quantitative analysis. Image and Vision Computing 24, 153-165 [Detail]
• Vetter,P., Butterworth,B., Johnston,A. (2006). Subitising made difficult: effects of attentional set on visual enumeration. Perception 35, . ISSN: 0031-5117 [Detail]
• Webberley,K.M., Buszko,J., Isham,V., Hurst,G.D.D. (2006). Sexually Transmitted Disease Epidemics in a Natural Insect Population. Journal of Animal Ecology 75, 33-43 [Detail]
• Whinnett,A., Brower,A.V.Z., Lee,M.M., Willmott,K.R., Mallet,J. (2006). Phylogenetic utility of Tektin, a novel region for inferring systematic relationships among Lepidoptera. Annals of the Entomological Society of America 98, 873-886 [Detail]
• Yang,Z. (2006), Computational Molecular Evolution,Oxford: Oxford University Press. ISBN: 978-0-19-856702-8. 376pp. [Detail]
• Yang,Z. (2006). On the varied pattern of evolution of two fungal genomes: a critique of Hughes and Friedman. Molecular Biology and Evolution 23, 2279-2282. ISSN: 0737-4038 [Detail]
• Yang,Z., Rannala,B. (2006). Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Molecular Biology and Evolution 23, 212-226. ISSN: 0737-4038 [Detail]

2005

• Arnold,D. H., Johnston,A. (2005). Sub-threshold motion influences apparent position (abstract). Journal of Vision 5(8), 202a. ISSN: 1534-7362 [Detail] [Online]
• Arnold,D.H., Johnston,A (2005). Motion induced spatial conflict following binocular integration. Vision Research 45, 2934-2942. ISSN: 0042-6989 [Detail]
• Arnold,D.H., Johnston,A., Nishida,S (2005). Timing, sight and sound. Vision Research 45, 1275-1284. ISSN: 0042-6989 [Detail]
• Bahia,P.K., Suzuki,R., Benton,D.C.H., Jowett,A.J., Chen,M., Trezise,D.J., Dickenson,A.H., Moss,G.W.J. (2005). A Functional Role for Small-Conductance Calcium-Activated Potassium Channels in Sensory Pathways Including Nociceptive Processes. Journal of Neuroscience 25, 3489-3498. ISSN: 0270-6474 [Detail]
• Bogle,I.D.L., Li,L., Saffery,P., Hetherington,J., Margoninski,O., Wright,R.J., Varela-Rey,A., Finkelstein,R., Callard,R., Seymour,R., Horton,R., Warner,A. (2005). Addressing the challenges of multiscale model management in systems biology. Proceedings of the 7th World Congress of Chemical Engineering, Glasgow, 10-14 July, , paper 30-004 [Detail]
• Bottomley,C., Isham,V., Basáñez,M-G. (2005). Population Biology of Multispecies Helminth Infection: Interspecific Interactions and Parasite Distribution. Parasitology 131, 417-433 [Detail]
• Bowles,R., Dennis,S.C.R., Purvis,R., Smith,F.T. (2005). Multi-branching flows from one mother to many daughters or to a network. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 363, 1045-1055. ISSN: 1364-503X [Detail]
• Carr,M., Hurley,I., Fowler,K., Pomiankowski,A., Smith,H.K. (2005). Expression of defective proventriculus during head capsule development is conserved in Drosophila and stalk-eyed flies (Diopsidae). Development, Genes and Evolution 215(8), 402-409. ISSN: 0949-944X (PAPER) 1432-041X (ON [Detail]
• Cinquin,O., Demongeot,J. (2005). High-dimensional switches and the modeling of cellular differentiation. Journal of Theoretical Biology 233(3), 391-411. ISSN: 0022-5193 [Detail] [Eprint]
• Dartnell,L., Simeonides E, Hubank,M., Tsoka,S., Bogle,I.D.L., Papageorgiou,L.G. (2005). Robustness of the p53 network and biological hackers. FEBS Lett 579/14 14, 3037-3042. ISSN: 0014-5793 [Detail]
• Dean,I., Harper,N.S., McAlpine,D. (2005). Neural population coding of sound level adapts to stimulus statistics. Nature Neuroscience 8(12), 1684-1689. ISSN: 1097-6256 [Detail]
• Gustafsson,K., Durrbach,A., Seymour,R.M., Pomiankowski,A. (2005). The role of ABO histo-blood group antigens in viral infections. Trends in Glycoscience and Glycotechnology 17(98), 285-294 [Detail] [Online]
• Hill,C.H., Troje,N.F., Johnston,A. (2005). Range and domain specific exaggeration of facial speech. Journal of Vision 5, 793-807. ISSN: 1534-7362 [Detail]
• Isham,V. (2005), Stochastic models for epidemics: current issues and developments. Series edited by Davison,A.C., Dodge,Y., Wermuth,N.. [Detail]
• Jha,S., Coveney,P.V., Harvey,M.J. (2005). SPICE: Simulated Pore Interactive Computing Environment. Supercomputing 2005, Proceedings of the ACM/IEEE SC 2005 Conference series. [Detail] [Online]
• Johnston,A., Arnold,D. H., Nishida,S (2005). Spatially localised distortions of perceived duration. Journal of Vision 5(8), 765a. ISSN: 1534-7362 [Detail] [Online]
• Koene,A., Arnold,D., Johnston,A. (2005). Multi-sensory comparison improves signal discrimination. Journal of Vision 6(6), 384a. ISSN: 1534-7362 [Detail] [Online]
• Koene,A., Fujisaki,W., Arnold,D., Johnston,A., Nishida,S. (2005). Cross modal correlation search in the presence of visual distractors (abstract). Journal of Vision 5(8), 876a. ISSN: 1534-7362 [Detail] [Online]
• MacCarthy,T., Pomiankowski,A., Seymour,R. (2005). Using large scale perturbations in gene network reconstruction. BMC Bioinformatics 6(11), . ISSN: 1367-4803 [Detail]
• MacCarthy,T., Pomiankowski,A., Seymour,R. (2005). Using large-scale perturbations in gene network reconstruction. BMC Bioinformatics 6, . ISSN: 1471-2105 [Detail] [Eprint] [DOI link]
• Nabarro,S., Himoudi,N., Papanastasiou,A., Gilmour,K., Gibson,S., Sebire,N., Thrasher,A., Blundell,M.P., Hubank,M., Canderan,G., Anderson,J. (2005). Coordinated oncogenic transformation and inhibition of host immune responses by the PAX3-FKHR fusion oncoprotein. Journal of Experimental Medicine 202(10), 1399-1410. ISSN: 0022-1007 [Detail] [Online]
• Ovenden,N., Smith,F.T. (2005). Vortices and flow reversal due to suction slots. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 363(1830), 1199-1208. ISSN: 1364-503X [Detail] [Online]
• Page,K., Monk,N.A.M., Maini,P.K. (2005). Complex pattern formation in reaction diffusion systems with spatially-varying parameters. Physica D 202, 95-115. ISSN: 0167-2789 [Detail]
• Seymour,R.M. (2005). Commensal diversity and the immune system: Modelling the host-as-network. Chapter 9 in McFall-Ngai,M.J., Henderson,B., Ruby,E.G. (ed.) The Influence of Cooperative Bacteria on Animal Host Biology. Advances in Molecular and Cellular Microbiology series. Series edited by Henderson,B., Wilson,M., Coates,A., Curtis,M.. New York: Cambridge University Press, 169-199. ISBN: 0-521-83465-1 [Detail]
• Smith,F., Gajjar,J.S.B. (2005). Preface to theme issue of Phil Trans Roy Soc A. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 363, 1043-1044. ISSN: 1364-503X [Detail]
• Sozou,P.D., Seymour,R.M. (2005). Costly but worthless gifts facilitate courtship. Proceedings of the Royal Society of London B 272(1575), 1877-1884. ISSN: 0962-8452 [Detail]
• Spencer,J.V.,O’Brien,J.M.D., Hill,H.C.H., Johnston,A. (2005). Do infants use a generalized motion processing system for discriminating facial motion? Perception 34, . ISSN: 0031-5117 [Detail]
• Watson,T.L., Johnston,A., Hill,H.C.H., Troje,N. (2005). Differential processing of facial motion. Visual Cognition 12, . ISSN: 1350-6285 [Detail]
• Yang,Z. (2005). The power of phylogenetic comparison in revealing protein function. Proceedings of the National Academy of Sciences of U.S.A. 102, 3179-3180. ISSN: 0027-8424 [Detail]
• Yang,Z. (2005). Bayesian inference in molecular phylogenetics. in Gascuel,O. (ed.) Mathematics of Evolution and Phylogeny. Oxford, England: Oxford University Press, 63-90 [Detail]
• Yang,Z., Rannala,B. (2005). Branch-length prior influences Bayesian posterior probability of phylogeny. Systematic Biology 54, 455-470. ISSN: 1063-5157 [Detail]

2004

• Allan,M.J., Callard,R., Stark,J., Yates,A. (2004). Comparing antigen-independent mechanisms of T cell regulation. JOURNAL OF THEORETICAL BIOLOGY 228(1), 81-95 [Detail]
• Anderson,A., Johnston,A., Tan,S. (2004). How cortical magnification could benefit depth, surface slant and self-motion estimation. Early Cognitive Vision Workshop, Isle of Skye [Detail]
• Anisimova,A., Yang,Z. (2004). Molecular evolution of hepatitis delta virus antigen gene: recombination or positive selection? Journal of Molecular Evolution 59, 815-826 [Detail]
• Ashmore,J., Gale,J. (2004). The cochlear amplifier. Current Biology 14(11), R403-R404. ISSN: 0960-9822 [Detail]
• Cotton,S., Fowler,K., Pomiankowski,A. (2004). Condition-dependence of sexual ornament size and variation in the stalk-eyed fly, Cyrtodiopsis dalmanni (Diptera: Diopsidae) Evolution 58, 1038-1046 [Detail]
• Durant,S., Johnston,A. (2004). Temporal dependence of local motion induced shifts in perceived position. Vision Research 44, 357-366. ISSN: 0042-6989 [Detail]
• Finkelstein,A., Hetherington,J., Li,L., Margoninski,O., Saffrey,P., Seymour,R., Warner,A. (2004). Computational challenges of systems biology. Computer 37(5), 26-33. ISSN: 0018-9162 [Detail]
• Harper,N.S., McAlpine,D. (2004). Optimal neural population coding of an auditory spatial cue. Nature 430(7000), 682-686. ISSN: 0028-0836 [Detail]
• Pomiankowski,A., Bridle,J. (2004). No sex please we’re at QLE (Quasi-Linkage Equilibrium) Heredity 93(407), [Detail]
• Pomiankowski,A.,Nöthiger,R., Wilkins,A. (2004). Evolution of the Drosophila sex determination pathway. Genetics 166, 1761-1773. ISSN: 0016-6731 [Detail]
• Seymour,R.M., Allan,M.J., Pomiankowski,A., Gustafsson,K. (2004). Evolution of the human ABO polymorphism through two complementary selective processes. Proceedings of the Royal Society London B 271(1543), 1065-1072. ISSN: 0962-8452 [Detail]
• Smith,F.T., Wilson,P.L. (2004). Compressible swirling flow though a significantly bent duct. Computers & Fluids 34, 891-926. ISSN: 0045-7930 [Detail]
• Sozou,P.D., Seymour,R.M. (2004). To age or not to age. Proceedings of the Royal Society of London B 271(1538), 457-463. ISSN: 0962-8452 [Detail]
• Tan,S., Dale,J., Anderson,A., Johnston,A. (2004). Perspective Mapping on Optic Flow. Early Cognitive Vision Workshop, Isle of Skye [Detail]
• Whim,M.D., Moss,G.W. (2004). FMRFamide tagging--how an ionotropic receptor can be used to measure peptide secretion. Methods 33(4), 295-301 [Detail]
• Wright,R., Varela Rey,M., Margoninski,O., Saffrey,P., Hetherington,J., Li,L., Seymour,R., Warner,A., Finkelstein,A. (2004). A new framework for the integration of models in biology. The Physiological Society: Communications 561P, PC31 [Detail]
• Wöergötter,F., Krüger,N., Pugeault,N., Calow,D., Lappe,M., Pauwels,K., Van Hulle,M., Tan,S., Johnston,A. (2004). Early cognitive vision: using Gestalt laws for task-dependent, active image-processing. Natural Computing 3, 293-321 [Detail]
• Yates,A., Callard,R., Stark,J. (2004). Combining cytokine signalling with T-bet and GATA-3 regulation in Th1 and Th2 differentiation: a model for cellular decision-making. J Theor Biol 231(2), 181-196 [Detail] [Online]

2003

• Akman,O., Broomhead,D.S., Clement,R.A. (2003). Mathematical models of eye movements. Mathematics Today 39, 54-59 [Detail]
• Anisimova,M., Nielsen,R., Yang,Z. (2003). Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. Genetics 164, 1229-1236. ISSN: 0016-6731 [Detail]
• Arnold,D.H., Durant,S., Johnston,A. (2003). Latency differences and the flash-lag phenomenon. Vision Research 43, 1829-1835. ISSN: 0042-6989 [Detail]
• Arnold,D.H., Johnston,A. (2003). Motion induced spatial conflict. Nature 425, 181-184. ISSN: 0028-0836 [Detail]
• Callard,R.E., Stark,J., Yates,A.J. (2003). Fratricide: a mechanism for T memory-cell homeostasis. Trends in Immunology 24(7), 370-375. ISSN: 1471-4906 [Detail]
• Clement.R.A., Nischal,K.K. (2003). Simulation of oculomotility in craniosntosis patients. Strabismus 11, 239-242. ISSN: 0927-3972 [Detail]
• Finkelstein,A., Hetherington,J., Saffrey,P., Warner,A. (2003), Model Orchestration: Addressing the Model Management Challenges of Systems Biology. University College London Dept. of Computer Science. [Detail] [Eprint]
• Freeman,E., Driver,J., Sagi,D., Zhaoping,L. (2003). Top-down modulation of lateral interactions in early vision: Does attention affect integration of the whole or just perception of the parts? Current Biology 13(11), 985-989. ISSN: 0960-9822 [Detail]
• Henderson,B., Seymour,R.M. (2003). Microbial modulation of cytokine networks. Chapter 10 in Henderson,B., Oyston,P.C.F. (ed.) Bacterial Evasion of Host Immune Responses. Advances in Molecular and Cellular Microbiology series. Series edited by Henderson,B., Wilson,M., Coates,A., Curtis,M.. Cambridge: Cambridge University Press, 1st. edition, 223-242. ISBN: 0521801737 [Detail]
• Johnston,A., Durant,S., Dale,J.L. (2003). A labile representation of spatial information in the visual cortex. Journal of Vision 3(9), 224 [Detail] [Online]
• Johnston,A., McOwan,P.W., Benton,C.P. (2003). Biological computation of image motion from flows over boundaries. Journal of Physiology 97, 325-334. ISSN: 0022-3751 [Detail]
• Stark,J., Brewer,D., Barenco,M., Tomescu,D., Callard,R., Hubank,M. (2003). Reconstructing gene networks: what are the limits? Biochemical Society Transactions 31, 1519-1525. ISSN: 0300-5127 [Detail]
• Stark,J., Callard,R., Hubank,M. (2003). From the top down: towards a predictive biology of signalling networks. Trends in Biotechnology 21(7), 290-293. ISSN: 0167-7799 [Detail]
• Tan,S., Dale,J.L., Johnston,A. (2003). Performance of three recursive algorithms for fast space-variant Gaussian filtering. Rea Time Imaging 9, 215-228 [Detail]

2002

• Anisimova,M., Bielawski,J.P., Yang,Z. (2002). Accuracy and power of Bayes prediction of amino acid sites under positive selection. Molecular Biology and Evolution 19, 950-958. ISSN: 0737-4038 [Detail]
• Durant,S., Johnston,A. (2002). Temporally offset motion-induced spatial misalignment [Abstract DOI 10.1167/2.7.647] JOURNAL OF VISION (HTTP:/JOURNALOFVISION ORG/2/7/647/) 2(7), 647 [Online]
• Durant,S., Savage,H., Johnston,A. (2002). Speed dependence of motion induced spatial misalignment. Perception 31, 40 [Detail]
• Hurst,G.D.D., Jiggins,C.D., Pomiankowski,A. (2002). Which way to manipulate host reproduction? Wolbachia that cause cytoplasmic incompatibility are easily invaded by sex ratio distorting mutants. American Naturalist 160, 360-373. ISSN: 0003-0147 [Detail]
• Nishida,S., Johnston,A. (2002). Marker correspondence not processing latency determines temporal binding of visual attributes. Current Biology 12, 359-368. ISSN: 0960-9822 [Detail]
• Vaidya,J.S., Hall-Craggs,M., Baum,M., Tobias,J.S., Falzon,M.,D'Souza,D.P., Morgan,S. (2002). Percutaneous minimally invasive stereotactic primary radiotherapy for breast cancer. Lancet Oncology 3(4), 252-253. ISSN: 1470-2045 [Detail] [Eprint]

2001

• Anisimova,M., Bielawski,J.P., Yang,Z. (2001). The accuracy and power of likelihood ratio tests to detect positive selection at amino acid sites. Molecular Biology and Evolution 18, 1585-1592. ISSN: 0737-4038 [Detail]
• Baigent,S., Stark,J., Warner,A. (2001). Convergent dynamics of two cells coupled by a nonlinear gap junction. Nonlinear Analysis: Theory, Methods and Applications, 47 (1), 257-268. ISSN: 0362-546X [Detail]
• Benton,C.P., Johnston,A. (2001). A new approach to analysing texture-defined motion. Proc of Royal Society London B 268, 2435-2443 [Detail]
• Benton,C.P., Johnston,A. (2001). Computational modeling of non-Fourier motion: further evidence for a single luminance based mechanism. Journal of the Optical Society of America 18, 2204-2208 [Detail]
• Cropper,S., Johnston,A. (2001). The motion of contrast envelopes: Peace and Noise. Journal of the Optical Society of America 18, 2237-2254 [Detail]
• Hill,H., Johnston,A. (2001). Categorising sex and identity from the biological motion of faces. Current Biology 11, 880-885. ISSN: 0960-9822 [Detail]
• Hosseini,R., Benton,D.C.H., Dunn,P.M., Jenkinson,D.H., Moss,G.W.J. (2001). SK3 is an important component of K+ channels mediating the afterhyperpolarizationin cultured rat SCG neurones. Journal of Physiology 535, 323-334. ISSN: 0022-3751 [Detail]
• Jalan,R., Kapoor,D., Steiner,C., Williams,R. (2001). Mars in decompensated Alcoholic Liver Disease with Multi-Organ Failure. Z Gastroenterol 39, 12-12. ISSN: 0044-2771 [Detail] [Online]
• Pomiankowski,A., Iwasa,Y. (2001). How does mate choice contribute to exaggeration and diversity in sexual characters? in Noe,R., van Hooff,J., Hammerstein,P. (ed.) Economics in Nature: The Evolutionary Biology of Economic Behaviour. Cambridge University Press, 203-219 [Detail]
• Seymour,R.M., Henderson,B. (2001). Pro-inflammatory - anti-inflammatory cytokine dynamics mediated by cytokine-receptor dynamics in monocytes. Mathematical Medicine and Biology 18(2), 159-192. ISSN: 1477-8599 [Detail] [DOI link]
• yates,a., callard,r. (2001). Cell death and the maintenance of immunological memory. Discr Cont Dynam Sys B 1, 43-60 [Detail]
• Yates,A., Chan,C.C.W., Callard,R.E., George,A.J.T., Stark,J. (2001). An approach to modelling in immunology. Briefings in Bioinformatics, 2 (3), 245-257 [Detail]

2000

• Arnett,T.R., Morrison,M.S., Henderson,B., Meghji,S. (2000). HCO3 acidosis stimulates bone resorption in mouse calvaria by activating quiescent osteoclasts. Journal of Bone and Mineral Research 15(4), 825 [Detail]
• Benton,C.P., Johnston,A., McOwan,P.W. (2000). Computational modelling of interleaved first- and second-order motion sequences and translating 3f+4f beat patterns. Vision Research 40, 1135-1142. ISSN: 0042-6989 [Detail]
• Messenger,N.J., Warner,A.E. (2000). Primary neuronal differentiation in Xenopus embryos is linked to the Beta3 subunit of the sodium pump. Developmental Biology 220, 168-182. ISSN: 0012-1606 [Detail]